Add macOS system preferences and fix package installations

- Fix claude-code package name (was incorrectly listed as claude-cli)
- Remove Node.js from installer (still required by gemini-cli)
- Add macOS system preferences configuration: auto-hide Dock, show hard disks, show all file extensions, auto-empty trash after 30 days
- Add Touch ID for sudo support (artginzburg/tap/sudo-touchid)
- Add automatic Homebrew updates (every 12 hours with upgrade and cleanup)
- Add new 's' option to configure system preferences separately

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

bin/install_homebrew_formulas

@@ -14,14 +14,14 @@ install_homebrew
 brew install atuin
 brew install bash
 brew install bash-completion
+brew install pinentry-mac
+brew tap artginzburg/tap
+brew install artginzburg/tap/sudo-touchid
+brew tap domt4/autoupdate
 
 # AI
-brew install claude-cli
 brew install gemini-cli
 
-# Development
-brew install node
-
 # Media
 brew install ffmpeg
 
@@ -31,4 +31,9 @@ brew install mole
 brew install rename
 brew install ykman
 
+# Configure automatic updates
+printf "\n🔧 Configuring automatic Homebrew updates...\n"
+mkdir -p ~/Library/LaunchAgents
+brew autoupdate start 43200 --upgrade --cleanup --immediate --sudo 2>/dev/null || printf "⚠️  Failed to configure brew autoupdate\n"
+
 printf "\n✅ Homebrew Formulas installation complete!\n"